rs33202613 SNP Detail

Summary

• ID
  rs33202613
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:81115024 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAGAAAAGT TTAACAACAA
  TTATTCTGCA TGGAAAATGT AAACCTCAAA AGCTAATTAA AACATTTCAA AGTCAATTAA
  AAACATCTCA GGCCTAGCAA TCCAGCCAAT TCTATAGCTA CAGCTCCTAA GCAGTCCAAT
  ATTATTTCTG ATAATATTCT CTTTTTATTC CCTACGAAGA TTGGCCACTT AATGGCAGAA
  Y
  GGTGCAGAAA TGATACCTGA ATGTGAAATT TAAATATGTC TTTTGTGTCA AGGCACACTT
  TCTTTCCTCT TCTTTTTTTT GTTTTTTTTG TTTCTTTATT TTTTTGTTTG TTTTTTGAGA
  CAGATTTCTC TGTGTGGCCC TGGCTGTTCT GGAACTCACT CTGTAGACCA GGCTGGCCTC
  GAACTCAGAA ATCCACCTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39506886	mCV22308206	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33202613					SNP	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:81115024 () rs orientation: forward

Symbol	Name	Function Class
Gm33596	predicted gene, 33596	within coordinates
Rr393006	regulatory region 393006	within coordinates
Rr531544	regulatory region 531544	489 bp proximal
Rr531545	regulatory region 531545	1520 bp proximal
Rr531546	regulatory region 531546	1864 bp proximal