rs33203220 SNP Detail

Summary

• ID
  rs33203220
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:138554206 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGTGGATCCC TGGATATGGC AGTCTCTACA TGGTCCATCC
  TTTCATCTCA GCTCCAAACT TTGTCTCTGT AACTCCTTCC ATGGGTGTTT TGTTCCCAAA
  K
  CTAAGGAGGG GCATAGTGTC CACACTTCAG TCTTCATTCT TCTTGAGTTT CATGTGTTTA
  GCAAATTATA TCTTATATCC TAGGTTTGGT ATCCTGTCC                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss45749954	mCV24572728	ABI	CRAMUS_MOUSE	f	SNP	T	T	G	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs33203220					SNP	T	T	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss144549824	ENSMUSSNP6703476	ENSEMBL	ENSEMBL_Sanger	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:138554206 () rs orientation: forward

Symbol	Name	Function Class
D5Dcr15	DNA Segment, Chr 5, Derry C. Roopenian 15	1138 bp proximal
D5Mit31	DNA segment, Chr 5, Massachusetts Institute of Technology 31	1030 bp proximal