rs33203437 SNP Detail

Summary

• ID
  rs33203437
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:72961579 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TGACCCCCAA CCATACAATT GTTTTGTTGC TACTTCCTAA CAGGAATTTT GCTACTGCCG
  TGAATCATAA TGTAAACAAC TGAGGTGCAG GATATCTGAT GTGTGGCCCC TGTGGGAGTT
  AGGACCCAGA GGTTGAGAAC CATAGGTGAT GGTGGGTCAT GGGAGTCATG CCTTGGGTTC
  CAGTCTAGCC CTGCTTTGGA TACTGCTCTC TTGCTTTCCT GGTCTGGCTG CTGTAAAGAG
  CTCTGTCTAC TACACACTCC CTCTACCAGA GAGCAGCTTT CCCTGACACA ACAGACTAAA
  M
  CTCTAAGCCG AATTCATCTT TCTTCTCCTA AGCTTCTCTG TCAGGTGTTC TGGCACAACA
  CAAAAGCAAC TCATATGCAT GCACGCCCTG TGCAGGTCAC CTTTATCCAT CTTTGCTTCT
  TGGGCTAGCC AAAGCCGCAT CCGCTTGTCA CAGTTTTACA GCTTGTCTCC CAGAGCACGA
  GCTTTTAGCT TTAACTGCCA TCTTTCCATC TTCCTTTTCC TATGGAAGTG CCCACGCACT
  GGGAAGGATT ACTGCTTATC TAATTTTTAG GGTCTCTGCC AGAAAAAAAC TAAAATAAGC
                                                                   
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss45749748	mCV22994932	ABI	CRAMUS_MOUSE	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs33203437					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:72961579 () rs orientation: forward

Symbol	Name	Function Class
Rr399125	regulatory region 399125	1056 bp downstream
Tec	tec protein tyrosine kinase	within coordinates
Tssr46619	transcription start site region 46619	1136 bp downstream