rs33206118 SNP Detail

Summary

• ID
  rs33206118
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:127820014 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGTGAGTT TTATCTCTGA
  AAGAGTGTAG GGTGGAGAGC AGCCATTCAG GGAGTCAGAG AGCCATTCAC AGGAAGTTCC
  AAAAAATACA TTTGGGGAGC TCTCTCATTT CCAAGACTGG GTTGAGCAGC TGCTCAAAGG
  CTGGCATGGA GGAAATCTTG CTGGGGCCTC CATTTGTAAT TCTCAGTAAG GAATTCTCCC
  R
  GCTCAGACAC AACCCAGCTC TTGAATTAGC ACACAGCTGT AGCCTCTTCC TATTGTTTAA
  ATAGGCCCAG CCCTATCAGA ACTGTTTCAT AGTTTATGCA GAATTAGACA TTGCCATAAT
  CTCATCCACG TGGCCATTGG CCATCCTAAG GCAATCTTTT TATCCCATCC AAGGGAGATT
  TTTTTTTCCC TTGAGCTAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47269558	NES11576138	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33206118					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47269558	NES11576138	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:127820014 () rs orientation: forward

Symbol	Name	Function Class
Gm44850	predicted gene 44850	54 bp upstream
Itgad	integrin, alpha D	within coordinates
Tssr75086	transcription start site region 75086	26 bp downstream
Tssr75087	transcription start site region 75087	48 bp downstream