rs33208146 SNP Detail

Summary

• ID
  rs33208146
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:108498835 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGTATACAA GCATATCTCC
  AAATCTCTAA TTATGAGGGG AGATAAGCAA TGTTAGATGT TTTACAGGAT TTCAGAATAT
  AGTGTGTTAT GAAATTGCCT ACATAATGTT CTTGTGGATA AATCAATGTG AAGAGAGCAT
  GTGAGTTTTG GGTATGAAAC ATGGCTATAT TACTTGGCCT TATGTGAGTA TAATTGTCAT
  S
  ATCTAAGAGT TCTACTATTT TCAAGAAAAA AGTAACTTCA AAAACAATGT CTAGTGTTAT
  ATGGGCAATT ATAAAACTAG TTAGTGAACA TATAATCAAC TCAAAAGGTT TGAGATTAGA
  GATGCAACTG AATTAACATG ATATATTGTT GTCATATCTC AACAAGGACA TTCCCAGCTC
  AATATCATAG TTGCAACATG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ
ss49456302	NES12804044	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	G	C	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ
rs33208146					SNP	C	C	C	C	G	C	C	C	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49456302	NES12804044	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:108498835 () rs orientation: forward

Symbol	Name	Function Class
Gm70690	predicted gene, 70690	1265 bp upstream
Rr416685	regulatory region 416685	893 bp proximal