rs33208435 SNP Detail

Summary

• ID
  rs33208435
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:96260589 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTCCA ACTGAAGAGC GATTCTCAGA
  R
  CAGTGAGATG GATTAGGCAT CTGAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46247722	mCV22583927	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss145644510	ENSMUSSNP5971309	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss322811792	CHEV_8_98057861	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33208435					SNP	G	G	A	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:96260589 () rs orientation: forward

Symbol	Name	Function Class
Ccdc113	coiled-coil domain containing 113	124 bp upstream
Cpgi20875	CpG island 20875	within coordinates
Rr668254	regulatory region 668254	within coordinates
Tssr78988	transcription start site region 78988	117 bp upstream
Tssr78989	transcription start site region 78989	170 bp upstream
Tssr78990	transcription start site region 78990	172 bp upstream