rs33211224 SNP Detail

Summary

• ID
  rs33211224
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:27748480 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  TCATGTAGAG GGAAGAGGTA ATTTTATGGG AATCTGTTCC CGAGCTCTCA TAGGGATGAA
  ACTCAGGTTA GATTTGGCAA TAAGTACCTT TATCTGCTTG GTCATCTCAA TCCCCCATAT
  CCTTTTATAT TCCATTAGAA GACTTGATAT GAATGAGTGC CTGCTCTGAG AGAGGCAGAA
  ATCACCATAG GCAAAATGGG TCTGCAAGAG AAAGAATTGA GCAGGGAATT TGTAAGAAAA
  CTCTAAAACG ATCATTCTCA GGGCCATGTG GTTCGCAAAG CCCAGGAGGG AAGCTTATCT
  K
  CCCTGGAAAG CTACTCAATG GAGCTACCAA GGCAGGGAAA CGGTGCTTAC CCTCAGGCTC
  AGGTCCCTCC TAGCTGTGGC TGTAGGCTTG TGGGCAATCA TCTTTAACTC CTCAACTTAT
  CCAAGTGCCT TAGGGGTAAT AGAACACTGT CTTAGTCAGT GTTCTATTGC TGTGACGAGA
  TACCATGACC ACTGCAACTC TTATAAAAGA GCACATTCAA TTGAGGTTTC TTGCTGTTTC
  AGAGGTTTAG TCCATTGTCA TCATGGCAGG GAGCATGGTG GCACACAGGC AGACATGGTG
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss46248218	mCV24519121	ABI	CRAMUS_MOUSE	f	SNP	T	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs33211224					SNP	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:27748480 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20220	CpG island 20220	1486 bp proximal
Eif4ebp1	eukaryotic translation initiation factor 4E binding protein 1	1875 bp upstream
Rr176179	regulatory region 176179	1480 bp distal
Rr186444	regulatory region 186444	920 bp proximal
Tssr76776	transcription start site region 76776	1869 bp upstream
Tssr76777	transcription start site region 76777	1880 bp upstream
Tssr76778	transcription start site region 76778	1943 bp upstream
Tssr76779	transcription start site region 76779	1977 bp upstream