rs33211755 SNP Detail

Summary

• ID
  rs33211755
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:47746080 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTAATCCCAG TACTTGGGAG
  CAAAGGCAGG CAGATCTCTA TGAATTTAAA GCCAGCTTGG TCTATATAGA AAGTTTCATG
  CCAGCCAGAG CTACAAAGTA ACATTTTGTC TCAAAAGAAT ATTCCAGGAG AGAAGAATCT
  GGTGTCTATA AAATACCAAA TTTTCTAGAG CTGTGTTCAG GGCATGACGT GGTCATTGTG
  W
  TCTGAAACAG ACTACAATGT GGTTATCCAT ACAGGCTCAG GCCAATGAGA TCAGTCAACT
  TTCTGATAGG CAGCACTAAC TAGACCCAGT AGATTTAAAG GGGGGCGGGG AGGGATGATG
  AAGAGGAGAA AGGGATGGGA GGGAAGAGTG GGAGAGGGAT AGCCTGCATG ATATGCTCAA
  GACACATTGT TTATGTATGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39508073	mCV25219134	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	T	T
ss145706706	ENSMUSSNP387204	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33211755					SNP	A	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:47746080 () rs orientation: forward

Symbol	Name	Function Class
AI661453	expressed sequence AI661453	1484 bp upstream
Cimip3	ciliary microtubule inner protein 3	within coordinates
Cpgi9259	CpG island 9259	1039 bp proximal
Rr339933	regulatory region 339933	1120 bp proximal
Tssr144911	transcription start site region 144911	1430 bp upstream
Tssr144912	transcription start site region 144912	1446 bp upstream
Tssr144913	transcription start site region 144913	1461 bp upstream
Tssr144914	transcription start site region 144914	1492 bp upstream
Tssr144915	transcription start site region 144915	1576 bp upstream
Tssr148434	transcription start site region 148434	1888 bp upstream
Tssr148435	transcription start site region 148435	1725 bp upstream
Tssr148436	transcription start site region 148436	1699 bp upstream