rs33215973 SNP Detail

Summary

• ID
  rs33215973
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:78918626 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTTC CCTGTTGCAT GTAAAAGACA
  Y
  TATTTCTAAA CAGACTTCCT AATCC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45751067	mCV23406355	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	T	C
ss321579831	CHEV_5_79199804	CHEVERUD	SCREENING_POP	f	SNP						C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33215973					SNP	T	T	T	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:78918626 () rs orientation: forward

Symbol	Name	Function Class
D5Mit204	DNA segment, Chr 5, Massachusetts Institute of Technology 204	197 bp proximal
D5Mit204.1	DNA segment, Chr 5, Massachusetts Institute of Technology 204.1	104 bp proximal