rs33218637 SNP Detail

Summary

• ID
  rs33218637
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:57312126 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCTG AGCCAGGCAG TGGTAGCGCA
  S
  GCCTTTAATC CCAGCACTTG AGAGG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss39509245	mCV23457630	ABI	CRAMUS_MOUSE	f	SNP	C	G
ss145809265	ENSMUSSNP3404990	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs33218637					SNP	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:57312126 () rs orientation: forward

Symbol	Name	Function Class
Gtf2f1	general transcription factor IIF, polypeptide 1	within coordinates
Rr529238	regulatory region 529238	1999 bp proximal
Tssr148848	transcription start site region 148848	693 bp upstream
Tssr148849	transcription start site region 148849	413 bp upstream
Tssr148850	transcription start site region 148850	298 bp upstream
Tssr148851	transcription start site region 148851	234 bp upstream
Tssr148852	transcription start site region 148852	323 bp downstream
Tssr148853	transcription start site region 148853	1937 bp downstream