rs33227561 SNP Detail

Summary

• ID
  rs33227561
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:132588282 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGAGCAACC ACAATCTAAT
  TAAACAAAAC CTAGGCACAC CATGGATTCA GATCTGACTT TCTGTTTCTC ACTGTTAGGT
  TTACTACACT AGCCATAACA AATGTTAAGT ACTGCTGTGT AGATGGTTGG GGCCTCTTTT
  TCCACAGTCA CTGACAAGAT CTGTAATACG GAAGGTACTC CACGTGAGCT CATTTTATAG
  S
  GCAGTTAAGG TAGAGCACCC TCCTAAAAAG AAGGCAGCCA GACAGGCTTA CATTGTAAGA
  CACTTCATTC TCTCAGGAAC AGGAACCTTG GAATTGTGAG CATTGAGTGC TACTTCAGAA
  GGTAAGTACA AGTGGAAGTT TTCAGTCACT TTATAAATAT TAGGTTACCC TCCCTCCCCC
  AAACAAAGAG TTCACATCTA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47272381	NES11563766	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	C	G	C	C	G	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33227561					SNP	C	C	C	C	C	C	G	C	C	C	G	C	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47272381	NES11563766	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:132588282 () rs orientation: forward

Symbol	Name	Function Class
Ctbp2	C-terminal binding protein 2	1010 bp downstream
Rr163833	regulatory region 163833	1607 bp proximal
Tssr75237	transcription start site region 75237	1668 bp downstream
Zranb1	zinc finger, RAN-binding domain containing 1	155 bp downstream