rs33228918 SNP Detail

Summary

• ID
  rs33228918
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:70337794 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAGG CAAAGACTGA AGGCTGAATG
  Y
  GGGCACCCAG AGTATGCACC CAGAG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46250358	mCV22674387	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	C
ss145115304	ENSMUSSNP2765419	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		C
ss322697618	CHEV_8_72409043	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33228918					SNP	C	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:70337794 () rs orientation: forward

Symbol	Name	Function Class
Cilp2	cartilage intermediate layer protein 2	within coordinates
Cpgi20423	CpG island 20423	1639 bp distal
Cpgi20424	CpG island 20424	224 bp proximal
Cpgi20425	CpG island 20425	667 bp proximal
Cpgi20426	CpG island 20426	1954 bp proximal
Gm33746	predicted gene, 33746	within coordinates