rs33231336 SNP Detail

Summary

• ID
  rs33231336
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:85439539 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATCCA CCAAACTTTC TCTGGACTGG
  R
  GCCTCGGCAG AGGCGGGGCA GGAGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46250258	mCV24193965	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss145392468	ENSMUSSNP1473536	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss322751427	CHEV_8_87236809	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33231336					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:85439539 () rs orientation: forward

Symbol	Name	Function Class
Nfix	nuclear factor I/X	within coordinates
Rr666590	regulatory region 666590	1427 bp distal
Tssr82128	transcription start site region 82128	883 bp downstream
Tssr82129	transcription start site region 82129	902 bp downstream
Tssr82130	transcription start site region 82130	923 bp downstream
Tssr82131	transcription start site region 82131	1346 bp downstream