rs33231507 SNP Detail

Summary

• ID
  rs33231507
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:24032265 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTCA AGGAATCCAT GTCTGAATGT
  K
  GGATAAACAA TTTTAGGCTC CTCAT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss39510488	mCV22837674	ABI	CRAMUS_MOUSE	f	SNP	T	T	G
ss145333327	ENSMUSSNP2602841	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss325327500	CHEV_17_23950258	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs33231507					SNP	T	T	G	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:24032265 () rs orientation: forward

Symbol	Name	Function Class
Gm49911	predicted gene, 49911	within coordinates
Srrm2	serine/arginine repetitive matrix 2	within coordinates
Tssr142962	transcription start site region 142962	913 bp downstream
Tssr142963	transcription start site region 142963	769 bp downstream
Tssr142964	transcription start site region 142964	128 bp upstream
Tssr142965	transcription start site region 142965	1825 bp upstream
Tssr142966	transcription start site region 142966	1905 bp upstream
Tssr142967	transcription start site region 142967	1981 bp upstream
Tssr142968	transcription start site region 142968	1996 bp upstream
Tssr146670	transcription start site region 146670	1950 bp downstream