rs33231881 SNP Detail

Summary

• ID
  rs33231881
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:102360628 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTGTGTGT GAGCATGTGC
  ATGTGTGTGT GCGTGTGTGT GAGCATCTGT GAATGAGTGT GTACATGCCT ATGCTTGTGT
  GTGTATGTGT GTGAGAGCAT GTCTGTGTAC ACGCCTGTGT GTGTGCGCGT GTGTGTGTGT
  GTGTGTGTGT GTGTACTTAT CAAATAACTT GCTTAATATA AAACAAAATC ACTTCAATGG
  K
  CATCTTACAG TGTTACCCAC TTGACAAGCT ATCTGTCCCT GGAGGCATGT CTGACCAACT
  GAAACAGGCC AGCACTCACC TGGGTGTGTC TGCAGTCACA CTCAACCTTT CTCAGAGACA
  ATACCCCATT CTTCAGACTG CCACAGATGA TAAAACAGCA TAGGGGAACA GGGATCCCAC
  ATCCACAAGT ACCAAGACAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47773166	NES11262928	PERLEGEN	MM_PANEL2	f	SNP	G	G	T	G	G	G	G	G	G	G	T	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33231881					SNP	G	G	T	G	G	G	G	G	G	G	T	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47773166	NES11262928	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:102360628 () rs orientation: forward

Symbol	Name	Function Class
Gm68206	predicted gene, 68206	within coordinates
Gm68211	predicted gene, 68211	1596 bp upstream