rs33231914 SNP Detail

Summary

• ID
  rs33231914
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:99870257 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTTAT TCACTTTACA TTCTAATCAC
  Y
  ACCCCTGTCT CCTCCCAGTC CCATC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45753158	mCV24791549	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss148920127	ENSMUSSNP6312131	ENSEMBL	ENSEMBL_Sanger	f	SNP	T		T
ss321625909	CHEV_5_100151417	CHEVERUD	SCREENING_POP	f	SNP				T	T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33231914					SNP	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:99870257 () rs orientation: forward

Symbol	Name	Function Class
A930011G23Rik	RIKEN cDNA A930011G23 gene	within coordinates
Gm73153	predicted gene, 73153	610 bp upstream
Tssr52054	transcription start site region 52054	412 bp upstream