rs33232834 SNP Detail

Summary

• ID
  rs33232834
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:132616844 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACGGAGCCAC GGCCAGACAT
  CACTGCCTGC CTGCTGTCGT AGAAGGTGAA GTCAGGCACG GAGCCCTTTC TTGATGCCAG
  TGAGTTATAA AAAGCTTCCC GGGACAGGTA GGACTCAGTA TCCTGGGCAC GATGGTTTAG
  CAGCTCGCAC CAGGTCCCTT CTCCAGGGCC ATACGTCAGA GAACTTCTCC TCCCTGGAGG
  Y
  CCAGCATTCT CCCAAGGGCC CTCATACCAG CCAGCAGCAT CCCAGCTCTG AGAACGGCCA
  ATATTGATGT GCCTGCTGGG AACCGGCATT GGCAGAGCAA ATGACTACAG CAAAGGCAGG
  GAGGAAGCCT TTCTTTATAA ATCTTCAATT ACATACATCC AAACCAGACC TGGCCACACG
  CGAGCCCTTC CGAGACGGCA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47272990	NES11562682	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33232834					SNP	T	T	T	T	T	T	C	T	T	T	C	T	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47272990	NES11562682	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:132616844 () rs orientation: forward

Symbol	Name	Function Class
Ctbp2	C-terminal binding protein 2	within coordinates
Rr656751	regulatory region 656751	123 bp proximal
Tssr75241	transcription start site region 75241	198 bp downstream
Tssr75242	transcription start site region 75242	354 bp downstream
Tssr75243	transcription start site region 75243	386 bp downstream