rs33232989 SNP Detail

Summary

• ID
  rs33232989
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:114580798 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGAA GCCAGTACCT CTCTGTAGCA
  S
  GAAGCAATGA GTGGTAAGGA CTGAC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46250902	mCV23924407	ABI	CRAMUS_MOUSE	f	SNP	C	G	C	G
ss145776757	ENSMUSSNP370121	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33232989					SNP	C	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:114580798 () rs orientation: forward

Symbol	Name	Function Class
Rr174139	regulatory region 174139	1998 bp distal
Rr179523	regulatory region 179523	within coordinates
Rr179524	regulatory region 179524	403 bp proximal
Tssr82999	transcription start site region 82999	719 bp downstream
Tssr83000	transcription start site region 83000	751 bp downstream
Tssr83001	transcription start site region 83001	767 bp downstream
Tssr83002	transcription start site region 83002	782 bp downstream