rs33234806 SNP Detail

Summary

• ID
  rs33234806
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:87786745 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ATAATTTTGG AGGTTGTATA AGAGAAGATT GAGGTTAGAG AGTGGTGGAA GCTATATAGA
  TACACTTCTT GTGTGCAGTG TTCTCAAAGT ATATACTTAT CAACACCCAG TTTAAGAAAT
  GACCATGGAA ATCCAAGTAC ATACAATGTC TAGATGGCTC ATTGGGTCTA GGCACAAGCA
  CAATGTTTTG ACAATATTAA TTTCAACCCA GATTCTCACA ATGTTCAGGT AGAAATATGC
  TCCCAGAGTT TTCATTTATG TAAATTGCCA CACTCAGGCA CACACACACA CACACACACA
  Y
  ACACACACTA AGAGCTATCT AAAAATACAA ACATTGTATT TCATAATTGA ATGATTCTGG
  ATGCCAACAT TCTTGTATAA AGTGTGCTAC TATAATTCAG ATTTCATTGG TGTTTGTCAT
  AAAATTGTTC TTTGTCATAT TGTTATGAAA CATTTTAGTT CTCAGCAGGG ACCACTTTAC
  AATGAGATAA ACTGGCCAAT AAAAGTAGAC ACTTAGCTTC TCCTAAAATT TATGTGAAAA
  TTAGTTTGTT TAAACTTCAT CACAGTCTAC CAAAAATATA TTATTGGATT TATGCCAATC
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45254089	mCV25336254	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33234806					SNP	C	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:87786745 () rs orientation: forward

Symbol	Name	Function Class
Rr373500	regulatory region 373500	121 bp upstream