rs33235601 SNP Detail

Summary

• ID
  rs33235601
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:144225204 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGAACTCATA GAGGCCTGCC TGCCTCTGCC TCCTGAGTAC
  TGGGATTCAA GATGTGAGCT ATCACATGAG GCAGTGTTTT GTTTTTTGAG ATTCTACTCC
  R
  TAGCTCTGTC TCTCTCTGAA TAGCCCAGGC TGTGTTCTAA CTCCGGAATC TTCCTACCCC
  AACCTTTCAA GCATTAGAAT TGTAGTGTGT ACCTCCTAC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45253635	mCV23223293	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G	A
ss147792547	ENSMUSSNP119879	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33235601					SNP	A	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:144225204 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Kat14	lysine acetyltransferase 14			Intron
				Noncoding-Transcript-Variant
Rr566452	regulatory region 566452			237 bp distal