rs33237415 SNP Detail

Summary

• ID
  rs33237415
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:46042193 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAGCATGGGG GGAGGGATAA CTATTTCTGC TTCTGTCTGG
  GGTGGGGGCT ATAACAGCAG GGACAGGAGT GCAGAAGCTT CTAGATCATG CCCCTATCCA
  R
  AGCAGCTGGT GTTTTGGAGC CAGGCAGAGC GGCTCTGCAG AAGCTGACCT GATTTGCCTA
  AGGGCCCCGC AGTTACAGAA ATGACCACTA GGTGTCAGC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39511553	mCV24294301	ABI	CRAMUS_MOUSE	f	SNP	G	G	G	A	G
ss145695571	ENSMUSSNP6019427	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G
ss325403964	CHEV_17_45868216	CHEVERUD	SCREENING_POP	f	SNP						G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33237415					SNP	G	G	G	A	G	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:46042193 () rs orientation: forward

Symbol	Name	Function Class
1600014C23Rik	RIKEN cDNA 1600014C23 gene	1597 bp downstream
BE949265	cDNA sequence BE949265	within coordinates
Rr331489	regulatory region 331489	within coordinates