rs33237514 SNP Detail

Summary

• ID
  rs33237514
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:41338665 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTGTG GGAATGCTGA AGCCTTAAAC
  Y
  GGGCAGGCTT TCCTCCCAAA AGGAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46251044	mCV24416916	ABI	CRAMUS_MOUSE	f	SNP		C	T	C
ss144674311	ENSMUSSNP5518403	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss322633440	CHEV_8_41970982	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33237514					SNP	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:41338665 () rs orientation: forward

Symbol	Name	Function Class
Rr662620	regulatory region 662620	1368 bp proximal
Slc7a2	solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	within coordinates
Tssr76991	transcription start site region 76991	963 bp downstream
Tssr76992	transcription start site region 76992	789 bp downstream
Tssr76993	transcription start site region 76993	within coordinates
Tssr76994	transcription start site region 76994	987 bp upstream
Tssr81068	transcription start site region 81068	1471 bp downstream