rs33238179 SNP Detail

Summary

• ID
  rs33238179
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:24935836 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGTG ATTCCAAGCT TTTTCATTTT
  R
  TAAAGTTAGA GGGCTGAAGA GTAAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39511569	mCV24348143	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss145361942	ENSMUSSNP7107742	ENSEMBL	ENSEMBL_Sanger	f	SNP	G			G
ss325333208	CHEV_17_24853807	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33238179					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:24935836 () rs orientation: forward

Symbol	Name	Function Class
Rnf151	ring finger protein 151	within coordinates
Rr339329	regulatory region 339329	1764 bp proximal
Tssr143066	transcription start site region 143066	1226 bp upstream
Tssr146774	transcription start site region 146774	1144 bp downstream
Tssr146775	transcription start site region 146775	1189 bp downstream