rs33240174 SNP Detail

Summary

• ID
  rs33240174
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:47447013 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  GTCCAACTCT GTTGAGCACT TAAGGTTTAC TTAGCCTTCT CAGGGCTTGG TGAAGATCAC
  ACCCCACCTC TACACATGTG ACTACAGACA ACTAGTCAGT GTTGAATGGC AAGAAATAAT
  CTTTTTCAGG AAATATTTCT CCAATCAAGC ATGCAATACC AAATGTTCTG CCCTGGAACC
  ATATACATAC AAGTAATATT ATATAGATTG AGCAGCTTGC ACATATATAT ATATATATAT
  ATATATATAT ATATATATAT ATATATATAT ATTGTGTGTG TGTGTGTGTG TGTGTGTGTG
  W
  GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT ATACACATAT GTATGTATAT
  ATATATATAT ATATATATAT ATACTCTTTT GAAAAATTAA AACTATACTA ATTTTTAAAT
  ATCACTGTAT TAGTAATTGA ATTATGGTAA TGATTAAATT CTAATGGATG CATTTAAAAT
  TTATGGCACT GTGAATATTA ATATTTAAAA GTTTTATCTC AAAGACCCCA ATGGAAGAGT
  TAGGGGAAGA ACTGAAGGAG CTGAAGGGGA TTGCAACCCC AGATGAGGAA CAATAATTAT
                                                                   
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss45253952	mCV25125666	ABI	CRAMUS_MOUSE	f	SNP	A	A	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs33240174					SNP	A	A	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:47447013 () rs orientation: forward

Symbol	Name	Function Class
D2Ucl22	DNA segment, Chr 2, University College London 22	within coordinates