rs33240483 SNP Detail

Summary

• ID
  rs33240483
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:162952112 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTGAAACA CACAAATCCA
  CTACCCCTCA TGGGTAGCCA TTTTTTCTTA TTTTGCACAT AAGGGGGAAT TAAAAATAAA
  GGTTGGTCAG AAGGAACAGC TGAGAGTCTG ATAGTAAAGT TGGAAATGAG TCAAATGTAA
  GATAGCTAAG GGGCCAGGAT GGCATTCTGG GAGCGCTGAC TGTGTGGGAC CTCACAGAGC
  R
  CTCTATCTTC CTCTGGCCTC GTTCACAGAT TGGCTGTCCA GTGAATCTAT GGTTATCTAA
  GAGAGAGAGC TTCCTGACAA TTTTAAGAGC TTTGGGAGCC CAATATTCTG GGTTCAATCC
  CCATGTCTGT GGTGCCTCAG GAAAATCTCC TAGAGTAATG ATTGCATTAT AGGGTACTGG
  TCGGGCCCTA GGAGTTTACA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45254711	mCV24890159	ABI	CRAMUS_MOUSE	f	SNP	G	A	A	A
ss148202078	ENSMUSSNP906733	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33240483					SNP	G	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:162952112 () rs orientation: forward

Symbol	Name	Function Class
Rr569286	regulatory region 569286	1485 bp distal
Rr569287	regulatory region 569287	1073 bp proximal