rs33241247 SNP Detail

Summary

• ID
  rs33241247
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:57410633 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGTCC AGGCATTGAG GGGTCCCTTT
  K
  CGTGAGAGTC ATGTAGGTGT GGGCT                                      
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss39512123	mCV23460077	ABI	CRAMUS_MOUSE	f	SNP	T	G	G
ss145810028	ENSMUSSNP2238092	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	G
ss325427547	CHEV_17_57243056	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs33241247					SNP	T	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:57410633 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9396	CpG island 9396	1559 bp proximal
Gm11110	predicted gene 11110	within coordinates
Rr529280	regulatory region 529280	1202 bp proximal
Rr529281	regulatory region 529281	1890 bp proximal
Tnfsf9	tumor necrosis factor (ligand) superfamily, member 9	1692 bp upstream
Tssr145375	transcription start site region 145375	1768 bp upstream