rs33243273 SNP Detail

Summary

• ID
  rs33243273
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:106520084 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGAACCAGGC AACCAAGCGC CTCTATTCCA GCTACTCAAG
  TGGTCTTGAC AGTATGTACT GGTGAAAATA CAAGCGGCGC AGGTTAAATG AGAAAAGGTT
  R
  TTGCTTTATC TAGGACAAAG ACTCTTAGTA TAGGTATTTT CCAAATTCCG TGTGGGACAT
  ATACCTATAC TTTAAAAAAA AAAAGCTTTT AAAAAAAGAA                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss47774016	NES11270989	PERLEGEN	MM_PANEL2	f	SNP	G	A	G	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs33243273					SNP	G	A	G	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47774016	NES11270989	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:106520084 () rs orientation: forward

Symbol	Name	Function Class
Gm28111	predicted gene 28111	within coordinates
Grm2	glutamate receptor, metabotropic 2	1649 bp downstream
Rr686373	regulatory region 686373	279 bp proximal
Rr686374	regulatory region 686374	471 bp proximal
Rr686375	regulatory region 686375	1099 bp proximal