rs33244684 SNP Detail

Summary

• ID
  rs33244684
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:6158348 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTAC GGCGGCAGAG CTTCGTAAGG
  W
  TTTTCCTTAC CGTTCTGCAG CAGGT                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39512063	mCV22810936	ABI	CRAMUS_MOUSE	f	SNP	A	T	A	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33244684					SNP	A	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:6158348 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8568	CpG island 8568	518 bp distal
Gm65964	predicted gene, 65964	1703 bp upstream
Rr405018	regulatory region 405018	1056 bp downstream
Tssr4988	transcription start site region 4988	782 bp downstream
Tssr142458	transcription start site region 142458	1591 bp downstream
Tssr142459	transcription start site region 142459	1510 bp downstream
Tssr142460	transcription start site region 142460	1473 bp downstream
Tssr142461	transcription start site region 142461	1456 bp downstream
Tssr142462	transcription start site region 142462	1254 bp downstream
Tssr142463	transcription start site region 142463	1235 bp downstream
Tssr142464	transcription start site region 142464	1198 bp downstream
Tssr142465	transcription start site region 142465	1166 bp downstream
Tssr142466	transcription start site region 142466	1151 bp downstream
Tssr142467	transcription start site region 142467	911 bp downstream
Tssr146313	transcription start site region 146313	1766 bp upstream
Tssr146314	transcription start site region 146314	1585 bp upstream
Tssr146315	transcription start site region 146315	1534 bp upstream
Tulp4	TUB like protein 4	within coordinates