rs33245397 SNP Detail

Summary

• ID
  rs33245397
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:85394742 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAAAC CATGAGGAAA CGGAAGCATG
  Y
  TGAGTGGAAT GGCCCCCTTG TTGGT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46252332	mCV24192616	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C	T
ss145391681	ENSMUSSNP2813908	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T		T
ss322751254	CHEV_8_87192012	CHEVERUD	SCREENING_POP	f	SNP						T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33245397					SNP	C	C	T	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:85394742 () rs orientation: forward

Symbol	Name	Function Class
Gm26664	predicted gene, 26664	within coordinates
Gm50464	predicted gene, 50464	within coordinates
Rr666569	regulatory region 666569	17 bp proximal
Rr666570	regulatory region 666570	1976 bp proximal