rs33246961 SNP Detail

Summary

• ID
  rs33246961
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:172186621 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTGT CTCAGCCTCC TGGGTGCTTG
  R
  GTTACAGATC TGCACCACCA TGTCA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45254854	mCV25119520	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A
ss148313972	ENSMUSSNP3964978	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		A
ss320618199	CHEV_2_172170201	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33246961					SNP	G	G	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:172186621 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12819	CpG island 12819	614 bp proximal
Fam210b	family with sequence similarity 210, member B	864 bp upstream
Rr56171	regulatory region 56171	179 bp proximal
Tssr21944	transcription start site region 21944	878 bp upstream
Tssr21945	transcription start site region 21945	894 bp upstream
Tssr21946	transcription start site region 21946	927 bp upstream
Tssr27939	transcription start site region 27939	969 bp downstream