rs33250244 SNP Detail

Summary

• ID
  rs33250244
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:4267722 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACAGACACT CTCCTAGACA
  AGGGATAGGC TGGGCCTTGG CAACCAGTAG GGCGGGATCA TTGTGCCTCT GGCCCACCAA
  CCAATCCAGC CATTTTGTGT GCCCTGGTCC TCTTTTCCTG CACTTGATGA CTATGGAGGC
  TAGATAGTCC TGCGACACCT GTGCCAGGTC ACCTATTTTG TAACTTTGAC TTTTCTCACA
  R
  CCCTTACCTG ATACGGTTGG TGGGAGAATG AGAACCCTGG GAGTTACTTT GTATTACATT
  TTATTTGGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TCCTTGTGCA
  CATGTCACTG CATACTGGTA AAAGTCAAAG AACAACTTGT AGGGCTCAGT TCACTCCTAC
  AACCAGTGGG TCCTGGAGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46253096	mCV23159922	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G	G
ss148555673	ENSMUSSNP1119843	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33250244					SNP	A	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:4267722 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20046	CpG island 20046	279 bp distal
Prr36	proline rich 36	263 bp upstream
Rr658993	regulatory region 658993	within coordinates
Tssr80255	transcription start site region 80255	1711 bp upstream
Tssr80256	transcription start site region 80256	719 bp upstream
Tssr80257	transcription start site region 80257	679 bp upstream
Tssr80258	transcription start site region 80258	596 bp upstream
Tssr80259	transcription start site region 80259	554 bp upstream
Tssr80260	transcription start site region 80260	470 bp upstream
Tssr80261	transcription start site region 80261	421 bp upstream
Tssr80262	transcription start site region 80262	219 bp upstream