rs33250936 SNP Detail

Summary

• ID
  rs33250936
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:96081683 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGGT GCCAGCTTGC CACCCCATCC
  R
  GACCCTGACC TGCTCCGTGG CTACA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46253064	mCV22583206	ABI	CRAMUS_MOUSE	f	SNP		A	A				G		A
ss60651672	NES16269011	PERLEGEN	MM_PANEL2	f	SNP	A		A	A	G	A		G	A	A	G		G	G	A	G		G
ss145643149	ENSMUSSNP3292055	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A						A
ss322811414	CHEV_8_97878955	CHEVERUD	SCREENING_POP	f	SNP												G					A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33250936					SNP	A	A	A	A	G	A	G	G	A	A	G	G	G	G	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60651672	NES16269011	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:96081683 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20872	CpG island 20872	1280 bp distal
Mmp15	matrix metallopeptidase 15	within coordinates
Rr668227	regulatory region 668227	1036 bp distal