rs33252226 SNP Detail

Summary

• ID
  rs33252226
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:156189291 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGAAGTAC ATCTCTTAAC
  ATATACAACT TTCAGGCCAC AGTTTTGAAG GTCTGAAGTA TCAAGTTGGT TTGATGAATT
  AGCCGGTTGG CACTTATGAA CACATTTATT GCCTTGCCAT CTTTAAAATA AGTCTTTAGA
  GTGTCACTGA AACTTTTGGA GTATTTTACA AATTCTTTCT TTTGGTGTTC AAGTGCCCTG
  Y
  GGTTCTGGTA CTGATATTTT TTGAAGACAT TATTCACTGT ATCAAGTAGT TCTTTTATTG
  CACTAGCTAT ATCCTTGATT GTCTGCAGAA ACCTCACTCT GTCATTGATC TCATCGGGAA
  TCTTACTGAG AATCTGTTTA AGTGCCCGTG CCTTTTCATT TAGGTCCTGG AATTCTGGCT
  CTGGCCGCTC AATCATGTAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45255868	mCV23225101	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	C
ss148070381	ENSMUSSNP5312596	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33252226					SNP	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:156189291 () rs orientation: forward

Symbol	Name	Function Class
Cnbd2	cyclic nucleotide binding domain containing 2	within coordinates
Gm14253	predicted gene 14253	within coordinates
Tssr27051	transcription start site region 27051	600 bp downstream
Tssr27052	transcription start site region 27052	660 bp downstream