rs33253706 SNP Detail

Summary

• ID
  rs33253706
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:84414964 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCTTTCTTT TGATTTTCAT TTTTTGGGGG TTTGTTTTTC
  CAGACAGGAA TTCTCTGTGT ATCCCTGGCT ATCCTGGAAT TGAACTCACA GATCTGTCTG
  M
  CTCTGCTTCC TGAGGGTGCC GGATTAAAGG TGTGTACCAT CATACCCAGA GTAATTTAAT
  GTTGTTGTTA TCATTGTTGT CTCTAGGTAC ACGTGTGGT                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
ss39513542	mCV24480939	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	A
ss146130473	ENSMUSSNP1441648	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	MSM/Ms
rs33253706					SNP	C	C	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:84414964 () rs orientation: forward

Symbol	Name	Function Class
Tssr146028	transcription start site region 146028	646 bp upstream
Tssr149629	transcription start site region 149629	1110 bp upstream