rs33254328 SNP Detail

Summary

• ID
  rs33254328
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:107865828 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AATGG CCCAAGGCAG AGGACTCCCG
  R
  TCAGTACTAC CCAAGAGCTT TCTGT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss47276139	NES11396584	PERLEGEN	MM_PANEL2	f	SNP	A		G	A	A	G	G		G	G		G
ss138670895	ENSMUSSNP5160416	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G			G
ss324151625	CHEV_12_109137779	CHEVERUD	SCREENING_POP	f	SNP								G			G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	CAST/EiJ	DBA/2J	FVB/NJ	LG/J	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33254328					SNP	A	A	G	A	A	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47276139	NES11396584	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:107865828 () rs orientation: forward

Symbol	Name	Function Class
4930440F04Rik	RIKEN cDNA 4930440F04 gene	within coordinates
Gm59523	predicted gene, 59523	1799 bp downstream