rs33254417 SNP Detail

Summary

• ID
  rs33254417
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:83726097 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAGAAACA GCTACAGTGT
  ACTTATGTAT AATAATAACT AAATCTTTGG GCCTGAGCAA TCGGGGTTGA CCCAACTGAG
  CAGAGATACT AAATTCAATT CCCAACAACC ACATGAAGGC TCACAACCAT CTGTACAGCT
  ACAGTGTACT CATATACATA AAATACAGAC ATACAGACAA GCAAAGGGAA AGAGAATATG
  R
  TATTTCATTT CCAGAGTCTA CACAGGCTTC ATGTGCCTCT CATGCCCCAG TCCCAAAGAG
  TCTCACATCT CAACAGAGTC AGTCACAAGT ACCCTCAGCA TGCCCACAGG CTTGCTTGAG
  CTACTTTGGC CTAGGGTGAA GCAAGTAAAA TACTTACCTT AGGTATAATA TAAAGAGATC
  ATACAGAGAG AGACACAGAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	FVB/NJ	LG/J	PWD/PhJ	SM/J
ss48283750	NES11749268	PERLEGEN	MM_PANEL2	f	SNP	A	A		G
ss322295417	CHEV_7_91225399	CHEVERUD	SCREENING_POP	f	SNP			A		G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	FVB/NJ	LG/J	PWD/PhJ	SM/J
rs33254417					SNP	A	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48283750	NES11749268	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:83726097 () rs orientation: forward

Symbol	Name	Function Class
Cemip	cell migration inducing protein, hyaluronan binding	within coordinates
Tssr73416	transcription start site region 73416	674 bp downstream