rs33254418 SNP Detail

Summary

• ID
  rs33254418
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:83726476 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATACAGAG AGAGACACAG
  ACACACACAC ACAGACACAC ACACAGACAC ACACAGACAC ACACACACAC ACACACAACA
  CACAGACACA CACACACACA CACACACACA ACACACAGAC ACACACACAC ACACACACAC
  ACACACACAC ACACACATCA AAAGGAACAG AAAGCCCAGT CCTTAATATA TAAATACTAC
  K
  GTAATCCAAC ATTTAAAAAT TTAGTCAAAA CATTCCATTC CACGAAGAAC CAAGGAACAA
  AATTCTAACT AAGAATAGGG TCAGCATAGT GGATTATTCT CTCCCTTTGC CTCTTGTTTA
  TAGGCTTCCT AGTGTGCAGT GGATGGCTGT AGAGTCACCC AGCTGTGAAC CGTGTCCATG
  AGTCGGAGCA AAAGAGGAAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss48283751	NES11749188	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G		G	G	T
ss322295419	CHEV_7_91225778	CHEVERUD	SCREENING_POP	f	SNP								G				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs33254418					SNP	G	G	G	G	G	G	G	G	G	G	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48283751	NES11749188	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:83726476 () rs orientation: forward

Symbol	Name	Function Class
Cemip	cell migration inducing protein, hyaluronan binding	within coordinates
Tssr73416	transcription start site region 73416	295 bp downstream