rs33254423 SNP Detail

Summary

• ID
  rs33254423
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:83728539 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCAAGGTCTT CTGTAGAATG
  TGTCAACAAT TTACATCCAG GAAATAAACT AATTTTCTTC ATTTCCAGCT TTTATAACAT
  ATGAGTGTCT TAGGAGGCTT AATACTGATT GACAGGTTTG AAAATAAACA GCCTATTTTT
  GCAGATAGCT CACAGCTGTA TTGCTTCCTC CCATGGTGAG CTCAACTGCA GTTTTCTGTC
  M
  GAGAGCCTTT GCCAATAGCA AGCCTTCTCC TCTGTATTCT TTAGGCTACC ACATAAAAAA
  TAATTCTGGT CTTATTTCTT TGAAAATTAA TGACACACAC ATATAGACAC CATTTAAAAA
  AAAACAGCAA GACACCAAAA TATTTAAAAG ACACAGCAAG ATAGACTATA GTGAAACTAA
  GATAATGCCA TTAATATGGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss48283757	NES11749205	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	C	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33254423					SNP	A	A	A	A	C	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48283757	NES11749205	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:83728539 () rs orientation: forward

Symbol	Name	Function Class
Cemip	cell migration inducing protein, hyaluronan binding	within coordinates
Tssr73416	transcription start site region 73416	1766 bp upstream