rs33256190 SNP Detail

Summary

• ID
  rs33256190
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:132354902 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCACAGCCTG GAGCACCTCT
  GGGTCCGTTC AGTGGGAGCG TCTCCAGGAG AGCCCCTCCC TCCCGGGACT CACTTGAAGA
  TGAGCAAACA GCACCAAGCC AGTGAAAACT GCTTCCACGG CTCTGAAGGG AGAGGAGAGG
  GGATTCCTTG TGCATGGCTT ACATCCCCCG TGGGCAGCCA TTCTAAAGCA CTTGCTTAGA
  Y
  GTGGATAACT CACAGGCACT TCAGGGATGG GATGGAGGAC ATAAACTGGT GGGGTCACTT
  TGGCCTTTAC CAGTGAAGTG GAGGCTGCAA TTTCATAGCC AGACATCTTG ACATGGGAAC
  CCGAGGGGAA GGGGGAATCG TCCTCAGCGC AGCAAAGCTG AATGGAACCC AGCTGTACGT
  TAACGGGAGA CATAAACGGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45256046	mCV22302773	ABI	CRAMUS_MOUSE	f	SNP	T	C	C	C
ss147620866	ENSMUSSNP170724	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C		C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33256190					SNP	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:132354902 () rs orientation: forward

Symbol	Name	Function Class
1700026D11Rik	RIKEN cDNA 1700026D11 gene	within coordinates
Gm74612	predicted gene, 74612	478 bp upstream
Rr367319	regulatory region 367319	97 bp downstream
Rr367320	regulatory region 367320	1022 bp upstream
Tssr26474	transcription start site region 26474	473 bp upstream
Tssr26475	transcription start site region 26475	920 bp downstream