rs33256426 SNP Detail

Summary

• ID
  rs33256426
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:107891241 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCTTTCCT TGTGTGGGAC
  CTGTGCCACA TAGGTGACCA CGTGGTTTCA TCCACCAAGT GTTAACTCGC CCTGGGAGAA
  AAAGCTCTGT GCTTACCGCC TTCACCACAG TGGCAAACCA ATTGCCATAG TCCCCTAAAC
  AGACACATCT TACTGGAAAT GTCAGTGACT CTTGCTTCCC TCACCTCCAG GAGCTCACAG
  K
  CTGGGGTATG CACATGGTGT CCAGTTAAGC ATTAGACCCA GAATACTGTC AGGCTGACCC
  AAATTGACTA AGTGGACTTC AGAAATACCA AGGGAAGAAG CAGAAAGATT AGGGGTGGGT
  CTAGAGGCTG TAGTCAAGCC AAACATGAAA GAACCAGAGG TGCTGAGGTG AGGAGAGAGA
  CAGAGTCCAG CAAGGCAGAG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
ss47276361	NES11395011	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	G	G	T
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
rs33256426					SNP	T	T	T	T	T	G	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47276361	NES11395011	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:107891241 () rs orientation: forward

Symbol	Name	Function Class
Bcl11b	B cell leukemia/lymphoma 11B	within coordinates
MCA1	DNA segment, MCA1, multiple CA repeat 1	1187 bp distal
Rr369605	regulatory region 369605	1191 bp upstream