rs33256817 SNP Detail

Summary

• ID
  rs33256817
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:56752126 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGCC TAAGTGGTCA CTTTTTGTCA
  Y
  AGCATCCCAG CTGTGGGACC CCTTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39513318	mCV22728970	ABI	CRAMUS_MOUSE	f	SNP	T	T	C	C	C
ss145807289	ENSMUSSNP5308160	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33256817					SNP	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:56752126 () rs orientation: forward

Symbol	Name	Function Class
Ptprs	protein tyrosine phosphatase receptor type S	within coordinates
Rr405382	regulatory region 405382	1264 bp downstream
Rr529082	regulatory region 529082	966 bp distal
Rr529083	regulatory region 529083	within coordinates
Rr529084	regulatory region 529084	262 bp proximal