rs33257215 SNP Detail

Summary

• ID
  rs33257215
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:107891736 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGCAGAAGA TGCCACAGCC
  ACCCCACAGA ATCCAGCTTT GCATTCCAGA GCCTTGGGTG GAGGGCTGGC CCTGCCCACC
  CACTCTGCCT CCCGAACTAA ACTAAATGCT GAACATTAAG AATCGGTCTG TTCCCAGGAG
  TTCTGTCTCC AAGGTCACAC CATGTCTGGG AAGGAAAACT GTTCCTTCAC GCAAATGCTC
  R
  CAGCAACTTC CCAGTACCCT TTATCCTTGT GTGGCCACCT GCCTCGCTCT CTACACTGCA
  GAGACTGATG AAGCACTGTG AGCCAGGGCC ATGGAGCAGG AGAAGGGCTG CTTTCACGGA
  ACCACAGTCA GCAAGACATC GGTGATTACG TGATTTCCAG CGAGGGTTCA AGTATCGAGT
  CCATAAGAAA GGTGAGTCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss47276370	NES11395016	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33257215					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47276370	NES11395016	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:107891736 () rs orientation: forward

Symbol	Name	Function Class
Bcl11b	B cell leukemia/lymphoma 11B	within coordinates
MCA1	DNA segment, MCA1, multiple CA repeat 1	1682 bp distal
Rr369605	regulatory region 369605	696 bp upstream