rs33258647 SNP Detail

Summary

• ID
  rs33258647
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:27720279 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TAAGATCAGC GCCTCTGAGC CCCCTCCCTT CACCCAGACT
  TATAGGACCT GACCCTGTCA TCCAATCTCC CAGTCAAAAT TTTTCCAAAT TGGATGTGGG
  S
  ATGAAAGGCT TAGAAATAAG CCTCTGGGAG TTAGGGAAAT GGCTAAATGA GTGAAGTGCT
  TGCCTTGCAA GCAGAAGGAC CTGAGTTTGA TGATTCCTG                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46253669	mCV22300316	ABI	CRAMUS_MOUSE	f	SNP	C	C	C	G
ss148886253	ENSMUSSNP315379	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33258647					SNP	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:27720279 () rs orientation: forward

Symbol	Name	Function Class
Adrb3	adrenergic receptor, beta 3	within coordinates
Cpgi20219	CpG island 20219	1738 bp distal
Gm45470	predicted gene 45470	570 bp upstream
Rr661485	regulatory region 661485	1555 bp distal
Tssr80795	transcription start site region 80795	1732 bp upstream
Tssr80796	transcription start site region 80796	1695 bp upstream
Tssr80797	transcription start site region 80797	1664 bp upstream
Tssr80798	transcription start site region 80798	554 bp downstream