rs33260655 SNP Detail

Summary

• ID
  rs33260655
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:172890678 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACAGC TTGTAGCTGG AAAGAATGTC
  Y
  GACATGCCCT GCCCACCCTG CTTAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45256750	mCV22952845	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss148328518	ENSMUSSNP2271593	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss320621362	CHEV_2_172874386	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33260655					SNP	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:172890678 () rs orientation: forward

Symbol	Name	Function Class
Gm36337	predicted gene, 36337	797 bp downstream
Gm74627	predicted gene, 74627	within coordinates
Gm74628	predicted gene, 74628	within coordinates
Rr571824	regulatory region 571824	within coordinates
Rr571825	regulatory region 571825	655 bp proximal
Rr571826	regulatory region 571826	1230 bp proximal
Rr571827	regulatory region 571827	1663 bp proximal