rs33263601 SNP Detail

Summary

• ID
  rs33263601
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:31405741 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCAGGTCTCT AAACCCACCC TCTAGGAAGT GGTTGGGCCT
  TGGTTATGGA GCTAGCTCAG AGCAGAAGCC ACGCCCACTC ATCTCCCAGA TGTAGCCCTA
  R
  ACTGTGGCAG GAGTCCAGAG CCCAGCAGCC AAGCCTGTCT GTAAAAGGCT GGACAGTTGG
  ATAGAAGACA GTTCAGGCTT GTGAGCTATG TGGACCTCA                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39514494	mCV24387623	ABI	CRAMUS_MOUSE	f	SNP	G	A	G
ss144591534	ENSMUSSNP2604775	ENSEMBL	ENSEMBL_Sanger	f	SNP	G		G
ss145457880	ENSMUSSNP7221027	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33263601					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31405741 () rs orientation: forward

Symbol	Name	Function Class
Tmprss3	transmembrane protease, serine 3	within coordinates
Tssr5079	transcription start site region 5079	509 bp upstream
Tssr5080	transcription start site region 5080	111 bp upstream