rs33267388 SNP Detail

Summary

• ID
  rs33267388
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:165467292 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACGATATGC GCATGTCTCC
  CACAGGGGTG AGATCTCTGT GAGGTCTGAG GTGCAAGGAG AGGGCGCTAC AGAAAAGACT
  AGAAGGCGCT AGAAAAAAAT GAGAACAAAA TAAGAGATCA TGGTGTTGCT TTTGATTGTG
  TTCTTACATT TCTATTCTTG TTTATTTTGA GACAGAGATT TAACTGTATG GCCCGGACTG
  R
  CCTTGAATGC TCAGCTCTCC CGCCTTGGCC TCTCATGTGC TGATGTCCCG TGGGTCTGCC
  TCTGCCCCTG GCTCTGGATT GTGCTATTTT TTGGATTTCT GCAACTTGGC ATGAGCTGAA
  GGAGGCACAG GACAATCACA AGGGAGGTGG GACTCTTACA CGTTAGAGAC AAAGTGCTTC
  TTATTCCCTC TTTTGGGGGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
ss45257459	mCV23022136	ABI	CRAMUS_MOUSE	f	SNP	G	A	A
ss148241866	ENSMUSSNP2913902	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
ss320608493	CHEV_2_165450872	CHEVERUD	SCREENING_POP	f	SNP				A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J	LG/J	SM/J
rs33267388					SNP	G	A	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:165467292 () rs orientation: forward

Symbol	Name	Function Class
Eya2	EYA transcriptional coactivator and phosphatase 2	Intron
Rr569965	regulatory region 569965	1513 bp proximal