rs33271224 SNP Detail

Summary

• ID
  rs33271224
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:119908252 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGTA AAGTATGGAT GTGAACAGCC
  W
  GGCAGGGGTG GTTGAACAGA GTGTG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	DBA/2J
ss45258111	mCV24422892	ABI	CRAMUS_MOUSE	f	SNP	T	A	A
ss147350724	ENSMUSSNP3336023	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	DBA/2J
rs33271224					SNP	T	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:119908252 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12136	CpG island 12136	1022 bp distal
Rr563630	regulatory region 563630	1211 bp distal
Sptbn5	spectrin beta, non-erythrocytic 5	within coordinates