rs33272259 SNP Detail

Summary

• ID
  rs33272259
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:28047182 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGCTG GGTGGGATTA AAGGTCTGTG
  Y
  ATTTATTGTC CTGTCAGGTT GTATT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39515787	mCV22518457	ABI	CRAMUS_MOUSE	f	SNP		C	T	C
ss145419819	ENSMUSSNP5767572	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		C
ss325349861	CHEV_17_27965153	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33272259					SNP	C	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:28047182 () rs orientation: forward

Symbol	Name	Function Class
Gm65125	predicted gene, 65125	962 bp upstream
Rr405125	regulatory region 405125	1705 bp downstream
Rr405126	regulatory region 405126	650 bp downstream
Rr524321	regulatory region 524321	973 bp distal
Rr524322	regulatory region 524322	1778 bp distal
Rr524323	regulatory region 524323	591 bp distal
Tssr147073	transcription start site region 147073	1250 bp upstream