rs33272388 SNP Detail

Summary

• ID
  rs33272388
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:124747416 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TACAC GGCTTGCAAC TCTAAGTCTC
  Y
  GCGGTCACCA ACTCCATCCG TGACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss46256005	mCV23471514	ABI	CRAMUS_MOUSE	f	SNP	T	C	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs33272388					SNP	T	C	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:124747416 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21265	CpG island 21265	within coordinates
Mir1967	microRNA 1967	1964 bp upstream
Taf5l	TATA-box binding protein associated factor 5 like	within coordinates
Tssr80012	transcription start site region 80012	478 bp upstream
Tssr80013	transcription start site region 80013	775 bp upstream
Tssr80014	transcription start site region 80014	842 bp upstream
Tssr80015	transcription start site region 80015	891 bp upstream
Tssr83422	transcription start site region 83422	257 bp downstream
Tssr83423	transcription start site region 83423	366 bp downstream
Tssr83424	transcription start site region 83424	682 bp downstream
Urb2	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	831 bp upstream