rs33273453 SNP Detail

Summary

• ID
  rs33273453
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:25405301 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GATCT GAGTTTCACA TCTATTTTAC
  R
  GATAGGAGAA TAGGTGTGTT AGCTA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39516251	mCV22798276	ABI	CRAMUS_MOUSE	f	SNP	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33273453					SNP	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:25405301 () rs orientation: forward

Symbol	Name	Function Class
4930568E02Rik	RIKEN cDNA 4930568E02 gene	1758 bp upstream
Cpgi8755	CpG island 8755	1031 bp distal
Cpgi8756	CpG island 8756	1536 bp proximal
Gm52286	predicted gene, 52286	1727 bp downstream
Rr370183	regulatory region 370183	1746 bp downstream
Rr523509	regulatory region 523509	1268 bp distal
Rr523510	regulatory region 523510	1580 bp proximal
Tssr5037	transcription start site region 5037	1764 bp downstream
Tssr143142	transcription start site region 143142	1725 bp downstream
Tssr143143	transcription start site region 143143	1709 bp downstream
Tssr146818	transcription start site region 146818	1925 bp upstream
Tssr146819	transcription start site region 146819	1859 bp upstream
Uqcc4	ubiquinol-cytochrome c reductase complex assembly factor 4	within coordinates